PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0548s0001.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 216aa    MW: 23316.3 Da    PI: 7.5592
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0548s0001.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.71.9e-202573355
                  AP2  3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         ++GVr ++ +gr++AeIrd ++    ++r++lg+f+taeeAa+a++aa+++++g
  Kalax.0548s0001.1.p 25 FRGVRKRP-WGRYAAEIRDpFK----KTRVWLGTFDTAEEAARAYDAAARSFRG 73
                         8*******.**********662....5************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008478.2E-142473IPR001471AP2/ERF domain
CDDcd000184.75E-192481No hitNo description
PROSITE profilePS5103223.9732481IPR001471AP2/ERF domain
SMARTSM003803.2E-382487IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-222582IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.7E-322581IPR001471AP2/ERF domain
PRINTSPR003673.1E-112536IPR001471AP2/ERF domain
PRINTSPR003673.1E-114763IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MRRGKAAAVN QSAAEMGDPE PEIRFRGVRK RPWGRYAAEI RDPFKKTRVW LGTFDTAEEA  60
ARAYDAAARS FRGPKAKTNF PLLPSSPPLQ HLPPPAPMNP LPPPPLAYHN PAHLFSGQYI  120
HRPASSSMSS TVETFSGPKL SNPLAALASA RVLFRQPVPE EGAECHSDCD SSSSVVNFEE  180
GGASGTWGVP DLNLPPPMDD ADMNCDDLKA TTLRL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-192586668ATERF1
3gcc_A1e-192586668ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004143195.11e-50PREDICTED: ethylene-responsive transcription factor 3-like
RefseqXP_008456400.11e-50PREDICTED: ethylene-responsive transcription factor 3-like
SwissprotO803393e-35ERF82_ARATH; Ethylene-responsive transcription factor 3
TrEMBLA0A0V0HV087e-53A0A0V0HV08_SOLCH; Putative ethylene-responsive transcription factor 3-like
STRINGPGSC0003DMT4000373599e-44(Solanum tuberosum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53170.16e-23ethylene response factor 8